MassLynx Mass Spectrometry Software

The challenges of MS and MS/MS analyses are often compounded by the use of several types of analytical instruments and high personnel turnover. To maintain – and even increase laboratory productivity, turn to Waters software to simplify interaction with your MS system and retain the ability to perform advanced experiments.

Waters MassLynx™ Software improves your MS system with its intuitive interface, intelligent instrument control, and software features built around the focus of your analysis: the sample. With much of its development driven by input from our extensive user base, MassLynx has evolved into a powerful software package that delivers the versatility and flexibility you require.

Transform Data Into Usable Results

To assist with both data acquisition and the transformation of data into usable results, MassLynx Software offers easy-to-use Application Managers that allow you to focus the power of MS on your laboratory's specific tasks.


MassLynx Mass Spectrometry Software Acquire, analyze, manage, and share your nominal and exact mass, MS and MS/MS data with MassLynx Software for Waters mass spectrometry (MS) systems.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
MassLynx Mass Detection Applications Perform open access, walk-up targeted MS analyses for LC-UV, LC-MS instruments with MassLynx Mass Detection Applications, OpenLynx Open Access and FractionLynx, and TargetLynx XS.
MassLynx Mass Detection Applications Perform open access, walk-up targeted MS analyses for LC-UV, LC-MS instruments with MassLynx Mass Detection Applications, OpenLynx Open Access and FractionLynx, and TargetLynx XS.
MassLynx High-Resolution Applications Identify and characterize all of your lab samples with MassLynx High-Resolution Applications from Waters MassLynx MS Software solutions, designed for high-resolution mass spectrometry data analysis.
MassLynx High-Resolution Applications Identify and characterize all of your lab samples with MassLynx High-Resolution Applications from Waters MassLynx MS Software solutions, designed for high-resolution mass spectrometry data analysis.
MassLynx High-Resolution Applications Identify and characterize all of your lab samples with MassLynx High-Resolution Applications from Waters MassLynx MS Software solutions, designed for high-resolution mass spectrometry data analysis.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
MarkerLynx Processes complex multivariate data from LC/MS, LC/MS/MS, GC/MS, and GC/MS/MS metabonomic and metabolomic studies.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
ProfileLynx Automates data processing for chromatography-based tests used in physicochemical property analyses for lead optimization.
MassLynx High-Resolution Applications Identify and characterize all of your lab samples with MassLynx High-Resolution Applications from Waters MassLynx MS Software solutions, designed for high-resolution mass spectrometry data analysis.
MassLynx High-Resolution Applications Identify and characterize all of your lab samples with MassLynx High-Resolution Applications from Waters MassLynx MS Software solutions, designed for high-resolution mass spectrometry data analysis.
MassLynx High-Resolution Applications Identify and characterize all of your lab samples with MassLynx High-Resolution Applications from Waters MassLynx MS Software solutions, designed for high-resolution mass spectrometry data analysis.
MassLynx Quantitation Applications Perform quantitative mass spectrometry analysis with MassLynx Quantitation Applications, mass spec software offerings include TargetLynx XS, Quanpedia, QCMonitor, QuanOptimize, TrendPlot, and MassLynx Skyline Interface.
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